BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D01SP1|AL429203
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 1920 0.0
>3x_Contig1221
Length = 4893
Score = 1920 bits (966), Expect = 0.0
Identities = 979/985 (99%), Gaps = 1/985 (0%)
Strand = Plus / Minus
Query: 1 gatcttattaagatgwaaccgactcaatacattgaatcgaggaaaaggaagaagccactt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4405 gatcttattaagatgaaaccgactcaatacattgaatcgaggaaaaggaagaagccactt 4346
Query: 61 ccaaaattacctgtcgtcgaaacctcacaggaaatagatgagaatggcagacttttaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4345 ccaaaattacctgtcgtcgaaacctcacaggaaatagatgagaatggcagacttttaaca 4286
Query: 121 gaagaggagaaattgagactggaattgaaaaagttccaacaccaagacatgaaattaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4285 gaagaggagaaattgagactggaattgaaaaagttccaacaccaagacatgaaattaaag 4226
Query: 181 aacaccttgaaaataaagctttctggtttaatggatcttttcaagaatcgttacaagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4225 aacaccttgaaaataaagctttctggtttaatggatcttttcaagaatcgttacaagagg 4166
Query: 241 ttcaggaaacctcctattgatgatacgttcttgattcacttatttgagcctgaaaccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4165 ttcaggaaacctcctattgatgatacgttcttgattcacttatttgagcctgaaaccttt 4106
Query: 301 gctgccaaccaaggctggcaacctgcttatgtaaaggacggcgatatgattctcgaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4105 gctgccaaccaaggctggcaacctgcttatgtaaaggacggcgatatgattctcgaagtt 4046
Query: 361 gctactggtagaaaattctataacatggatttggatattatcgaagagagattatggaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4045 gctactggtagaaaattctataacatggatttggatattatcgaagagagattatggaat 3986
Query: 421 ggttattactctgagccgaaacaattcctaaaagatatcgagttgatttatcttgatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 ggttattactctgagccgaaacaattcctaaaagatatcgagttgatttatcttgatgct 3926
Query: 481 accacatcagcggacagagaaagagtaataaaggcatctganatgtttgctaatgcacaa 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3925 accacatcagcggacagagaaagagtaataaaggcatctgaaatgtttgctaatgcacaa 3866
Query: 541 gtcggcatcgaagatatctcgcaaccagaatttgttgcagaatgcaaagccacacgccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3865 gtcggcatcgaagatatctcgcaaccagaatttgttgcagaatgcaaagccacacgccaa 3806
Query: 601 agagaacttctaagacaagaattatttatwaaggaaaaaagtgaacgagtggataaggaa 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3805 agagaacttctaagacaagaattatttataaaggaaaaaagtgaacgagtggataaggaa 3746
Query: 661 caacaaatacttttgcagaacaatccaactcaaactgattcgatcgctacagttgaacta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3745 caacaaatacttttgcagaacaatccaactcaaactgattcgatcgctacagttgaacta 3686
Query: 721 actaccgcctcaggaaaccaagtgcagtctcaggctcaattagatgcgggtacactagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3685 actaccgcctcaggaaaccaagtgcagtctcaggctcaattagatgcgggtacactagat 3626
Query: 781 ctaggtg-aamgtctcaagtagagccattcacaacacagcctgtgaactttggaaccaat 839
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3625 ctaggtgaaacgtctcaagtagagccattcacaacacagcctgtgaactttggaaccaat 3566
Query: 840 gatgctgatttggcaaaaacggacactgttcaagattattcggagagcaggcttaccaat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3565 gatgctgatttggcaaaaacggacactgttcaagattattcggagagcaggcttaccaat 3506
Query: 900 gcggaaaatggctttgctcagactagtcacaataattcgcatttaactgttgatactgaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3505 gcggaaaatggctttgctcagactagtcacaataattcgcatttaactgttgatactgaa 3446
Query: 960 gatgcaactaataaggrgcaggaaa 984
|||||||||||||||| ||||||||
Sbjct: 3445 gatgcaactaataaggagcaggaaa 3421
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7093
Number of Sequences: 1807
Number of extensions: 7093
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)